Phylum Amoebozoa Lühe, 1913
   Class Tubulinea Smirnov et al., 2005
   Class Flabellinea Smirnov et al., 2005 see Subclass Flabellinia Smirnov et al., 2005
   Class Conosea (T. Cavalier-Smith, 1998) A. Smirnov et al., 2005 see Subphylum Conosa Cavalier-Smith, 1998
   ?Order Acanthopodida Page, 1976 see Order Centramoebida Rogerson & Patterson, 2002
   ?Family Stereomyxidae Grell, 1966
   ?Family Corallomyxidae Page, 1987 see Family Stereomyxidae Grell, 1966
   ?Genus Dermamoeba Page & Blakey, 1979
   ?Genus Filamoeba Page, 1967
   ?Genus Gephyramoeba Goodey, 1914
   ?Genus Mayorella Schaeffer, 1926
   ?Genus Phalansterium Stein, 1878
   ?Genus Thecamoeba Fromentel, 1874
   ?Platyamoeba stenopodia Page, 1969 see Stenamoeba stenopodia (Page, 1969)
   ?Genus Cochliopodium Hertwig & Lesser, 1874
   ?Genus Gocevia Valkanov, 1932
   ?Genus Janickia
   ?Genus Malamoeba Taylor & King, 1937
   ?Genus Malpighamoeba Prell, 1926
   ?Genus Paradermamoeba Smirnov & Goodkov, 1993
   ?Genus Paragocevia Page, 1987
   ?Genus Parvamoeba Rogerson, 1993
   ?Genus Pellita Smirnov & Kudryavtsev, 2005
   ?Genus Pseudothecamoeba Page, 1988
   ?Genus Sappinia Dangeard, 1896
   ?Genus Stygamoeba Sawyer, 1975
   ?Genus Thecochaos Page, 1981
   ?Genus Trichosphaerium Schneider, 1878
   ?Genus Flamella Schaeffer, 1926